Oregon State University
Electron Microscope Facility

 

USER INFORMATION AND FACILITY POLICIES

 

Services 

The Electron Microscopy Facility provides instrumentation, skills, and specialized training necessary to analyze microstructure of solid biological and physical substances.  Bulk, particulate and macromolecular materials from approximately 10 cubic centimeters to 0.1 nanometer can be imaged with our microscopes.  The laboratory operates as a service and offers analytical procedures described below. 

Instrument operation and specimen preparation services can be provided.  Clients are encouraged to consult with our staff regarding experimental design, data requirements, sampling, specimen preparation, and scheduling before committing experiments to microscopy.  Many clients have laboratory personnel operate instruments but are present during microscopy sessions.  There is no charge for estimates or consultations.  Results and sample materials not consumed for microscopy are returned to the client. 

Priority is given to budgeted university research although work may be accepted from other sources.  Work is scheduled as received unless special handling is requested.  Data return time is usually under two weeks.  Data produced for clients and information of a proprietary nature is treated with strict confidentiality. 

TRANSMISSION ELECTRON MICROSCOPE SERVICES 

Transmission electron microscopy (TEM) and scanning transmission electron microscopy (STEM) provide means to study details of structure too small to be seen by conventional compound light microscopy.  High quality light microscopes resolve details larger that 0.2 micrometer to useful magnification as high as 1000x.  Our transmission electron microscope resolves to about 0.1 nanometer (nm) with a direct magnification range from 30x to 750,000x.  TEM and STEM supplements, but does not necessarily replace, light microscopy or other analytical techniques.   

For transmission and scanning transmission EM, an electron beam projected through the microscope column is focused by magnetic lenses.  The beam acquires information by loss of energy and electron scattering as it passes through the specimen.  Because electron beams have limited ability to penetrate substances, specimens must be very thin and the instrument column kept at high vacuum to enhance electron transmission and penetration. Images and electron diffraction patterns formed by the microscope may be viewed directly or recorded on photographic film. 

For transmission and scanning transmission EM, specimen thinness requirements restrict applications to studies of tiny particles, macromolecules, copies (replicas) of surfaces, microtomed sections, and chemically thinned foils.  Techniques are available to produce suitably thin specimens from most substances.  Transmission microscopy is usually the appropriate method for microstructure imaging.  Scanning transmission methods are often more appropriate to imaging relating specimen chemistry with microstructure. 

Specimen preparation for TEM/STEM can be exacting, tedious, and time consuming.  Although particulate specimens may often be prepared and ready for examination within a few minutes, bulk biological tissues or physical specimens must be subjected to lengthy, involved preparation procedures which ultimately reduce the samples to less than100 nanometers (nm) in thickness.  A sample for TEM must fit on a specimen support screen 3.0 mm in diameter and be stable in a high vacuum and under electron beam irradiation.  The EM Facility can prepare most specimens for TEM/STEM.  Charges are made for microscope time, technical assistance, film, and specimen preparation services.  X-ray spectrometry and image analysis services are available with TEM and STEM microscopy. 

SCANNING ELECTRON MICROSCOPY SERVICES 

Scanning electron microscopy (SEM) permits study of three dimensional surface detail of biological and physical specimens at magnifications approaching100,000 times with spatial resolution approaching 1.5 nm.  In SEM, an electron beam, focused by magnetic lenses, is projected through an evacuated column and scanned as a fine probe of electricity across the specimen surface.  Energy from this scanning beam causes the specimen to emit radiation that is detected and used to image the specimen surface.  Images produced from several types of emitted radiation may be viewed directly or recorded photographically to yield structural, chemical and electrical information about the sample being examined. 

Because the beam does not pass through the specimen, sample thickness is not a limitation in SEM; samples several cubic centimeters in volume may be accommodated.  Specimens for SEM are most aesthetic when they have pronounced three dimensional topography.  Wet samples must be prepared by drying methods which retain the hydrated appearance of fine structure, and samples that behave as electrical insulators are usually coated with a conductive metal film before microscopy.  X-ray spectrometry and image analysis services are available with SEM microscopy. 

Charges are made for instrument time, technical assistance, and specimen preparation procedures. 

X-RAY SPECTROMETRY 

Combining electron microscopy with x-ray spectrometric analysis can be an informative method for more fully characterizing the microstructure and microchemistry of solid objects.  Our electron microscopes image structure at high magnification with high spatial resolution.  Simultaneously with the production of an image, a nondestructive x-ray spectrometric analysis can generate qualitative and quantitative elemental composition information from the specimen being examined.  The chemical data may be mapped over a structural image to show distribution of elements with respect to structure, or may be presented as graphed spectra and tabulated reports. 

Carbon and all other elements with atomic numbers greater than 5 (boron) are detectable by x-ray spectrometry.  On appropriate samples spatial resolution of elemental concentrations may exceed one micrometer and quantities as low as about 1 x 10-5 gram may be detected to an accuracy of +/-1 weight %. 

Samples for TEM/STEM spectrochemical analysis may be in the form of small, dry particulates or dry bulk substances thinned to flat, thin slices.  Wet samples for SEM/x-ray spectrochemical analysis should be prepared and dried by methods which retain hydrated appearance and chemistry of fine structure, and samples that behave as electrical insulators must be coated with conductive carbon films before examination.  SEM samples may be up to 100 mm3.  Specimens for SEM are most aesthetic when they have pronounced three dimensional topography, whereas ideal specimens for quantitative x-ray spectrochemical analysis are flat and chemically homogeneous, although rough, heterogeneous substances can be evaluated qualitatively.  The EM facility can assist with the preparation of samples for TEM/STEM/SEM and energy dispersive x-ray analysis. 

Charges are made for microscope time, film, specimen preparation procedures, and, when appropriate, for technical assistance with qualitative and quantitative data reduction and analysis reports. 

Those interested in x-ray spectrometry should refer to the information in the section "Guidelines for X-ray Energy Spectrometer" near the end of this manual. 

IMAGE METROLOGY 

Image analysis may enhance a study by providing more qualitative or quantitative descriptions of imaged structural features.  The analysis is accomplished by digitizing an image, modifying image grey levels, and computing size parameters such as perimeter or area and shape factors such as the ellipicity of image features.  Image digitization, modification, and analysis is done by a computer which directly accepts images, measures and statistically evaluates the identified morphological details, and produces a tabulated report. 

Image analysis capabilities are available in the Electron Microscope Facility.  Charges cover film, graphic supplies, and image acquisition, data reduction, and report assistance. 

EDUCATIONAL SERVICES 

The Facility's main mission is research support service.  Our instructional programs support our research orientation. 

Demonstration and lecture services are available in support of institutional instructional programs.  Instructional accounts are charges for demonstration services.  Guest lecturing requiring less than 2.0 hours staff time is available at no charge. 

The Facility sponsors instructional programs for clients, students and interested persons wanting information about capabilities and limitations of equipment, the analyses which can be performed, or specific specimen preparation or instrument operation techniques.   

Instruction in hands‑on instrument operation and/or specimen preparation procedures is a routine function of this laboratory but limited to faculty, staff and students who demonstrate clear, valid need for training.  Instruction is not provided simply because an applicant believes it would be "nice to know" or "might be useful someday".  Training is scheduled for small groups. Charges may be made to cover costs of consumables or staff time. 

TRAINING OPTIONS 

We provide two options for those wanting to learn about electron microscopy. Please note that these courses will not be offered in 2010.

BI 466/566 Option:   For those with a general curiosity about electron microscopy, undertaking research which requires electron microscopy, or intending to operate electron microscopes, BI 466/566, offered for 3 credits in Winter term, is an overview lecture and demonstration course covering:

 

            Instrument types and development;

                                    Electron beams, signal production;

            Lenses, lens properties;

            Vacuum systems;

            Specimen preparation;

            Image capture and analysis;

            Electron diffraction;

            Electron energy loss and x-ray spectrometries  

This course addresses transmission and scanning electron microscopy applied to biological, earth sciences, and materials studies and gives enrollees an ability to understand electron microscopy literature, design and interpret research using electron microscopy, and better appreciate the complexities involved in specimen preparation and electron microscope operation. 

BOT 505A Option:  Persons with funded research which will be done at OSU who need to do lengthily "hands-on" electron microscopy projects may receive technical instruction specific to the types of specimens and microscopy required by their studies.  Training can be arranged in Summer, Fall, or Spring term, and academic credit adjusted to reflect the time and scope of the training provided.  Training arrangements and consent of the Electron Microscope Facility instructor should be formalized before enrolling for specialized instruction.

           

Revision: 2003-2004

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